Information for 5-TTTGCCTHTTGGCTBT (Motif 2)

A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
Reverse Opposite:
C T G A T C G A G T C A A C T G A T G C G T A C C G T A G T C A C G T A C G T A C T A G T A C G A G T C T C G A G T C A G T C A
p-value:1e-14
log p-value:-3.429e+01
Information Content per bp:1.721
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 21.8bp
Average Position of motif in Background49.3 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
-NTGCCCTTGGGCGN-
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.65
Offset:8
Orientation:forward strand
Alignment:TTTGCCTHTTGGCTBT
--------TTGGCA--
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
-------NTTGGCANN
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
----CCGATTGGCT--
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
------NNTTGGCANN
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT-----
----NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT-----
----NNNNTTGGCGCCGANNN
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT-
-----TGATTGGCTANN
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
--TGCCCTNGGGCA--
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTGCCTHTTGGCTBT
--TGCCCTNGGGCA--
 A C G T A C G T A G C T A C T G A T G C A G T C C G A T G A C T A C G T A C G T A C T G A T C G A G T C A C G T A G C T A G C T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T