Information for 9-CCTTATTAAA (Motif 17)

G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T G T C A C T G A A C G T C G T A C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.657e+01
Information Content per bp:1.923
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets38.9 +/- 28.5bp
Average Position of motif in Background48.3 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:CCTTATTAAA
----ATTAAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCTTATTAAA-----
CCGTATTATAAACAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCTTATTAAA
-CTAATTAA-
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

GSX2/MA0893.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTTATTAAA
ACTAATTAAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTTATTAAA
CCYMATAAAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

GSX1/MA0892.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTTATTAAA
CCTAATTAAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTTATTAAA
AGCTCATTAT-
 A C G T G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCTTATTAAA
-GTAATTAA-
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTTATTAAA
NCYAATAAAA
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

mix-a/MA0621.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTTATTAAA-
NCTAATTAANN
 G T A C A G T C A C G T A C G T C G T A A G C T A C G T C G T A C G T A C G T A A C G T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T