Information for 8-TGCCTTTTAG (Motif 16)

A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A C G T A C G T A C G T A A C T G T C A G A T G C C G T A
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.875
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif82.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets48.5 +/- 19.6bp
Average Position of motif in Background46.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGCCTTTTAG----
--CCTTTTATAGNC
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTTTAG
TTGACTTTT--
 A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCCTTTTAG-
-ANCGTTTANN
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTAG----
TNCCTTTGATCTTN
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCCTTTTAG-
-NNCAATTANN
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T
A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCTTTTAG--
TNCCTTTGATGT
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCCTTTTAG--
--CCTTTGATGT
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTTTTAG-----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCCTTTTAG----
----TTTTATTRGN
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCCTTTTAG--
TGACCTTTNCNT
 A C G T A T C G A G T C A G T C A C G T A C G T A C G T A G C T C T G A A C T G A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T