Information for 12-CTWTKTTCTKCTG (Motif 15)

A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G G T C A C T G A C T A G T G C A C T G A G T A C G T C A G C A T C T G A T C A G
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.705
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif117.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets50.8 +/- 27.7bp
Average Position of motif in Background50.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTWTKTTCTKCTG
------GCTTCC-
 A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTWTKTTCTKCTG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTWTKTTCTKCTG
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTWTKTTCTKCTG
YCTTTGTTCC----
 A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTWTKTTCTKCTG
AACCCTTTGATCTTT--
 A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTWTKTTCTKCTG
CCTTTGATCTTT--
 A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTWTKTTCTKCTG--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTWTKTTCTKCTG-----
---TNTCCTGCTGTGNNG
 A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CTWTKTTCTKCTG--
---CCCCCTGCTGTG
 A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTWTKTTCTKCTG
-----TTCCTCT-
 A G T C G A C T C G T A A C G T C A T G A G C T A C G T A G T C A G C T A C G T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T