Information for 10-GTTTGTCACCCTCCCA (Motif 22)

A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G A C T G G T C A C T A G A C T G A C T G A C G T A C T G C G T A A G T C C G T A G T C A C T G A A G T C
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.917
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 20.3bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGTCACCCTCCCA
TGTCTGDCACCT-----
 A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTTTGTCACCCTCCCA
CTGTCTGTCACCT-----
 A C G T A C G T A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
------CRCCCACGCA
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
--TTGGCATGGTGCCA
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTTGTCACCCTCCCA
--YTGWCADY------
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTTTGTCACCCTCCCA
---TGTCANYT-----
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
--NTGTCAN-------
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
-TTTCACACCTN----
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
---TGACACCT-----
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTTTGTCACCCTCCCA
-KTTCACACCT-----
 A C T G A G C T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T G T A C A T G C A G T C C G T A
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T