p-value: | 1e-8 |
log p-value: | -1.892e+01 |
Information Content per bp: | 1.678 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.38% |
Number of Background Sequences with motif | 46.8 |
Percentage of Background Sequences with motif | 0.10% |
Average Position of motif in Targets | 44.9 +/- 23.6bp |
Average Position of motif in Background | 47.8 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1/MA0509.1/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCCCGCGTTGCCATGG---- ------GTTGCCATGGNAAC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCCCGCGTTGCCATGG--- -----NGTTGCCATGGCAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCCCGCGTTGCCATGG--- -----GGTTGCCATGGCAA |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CCCCGCGTTGCCATGG-- ---NNCGTTGCTATGGNN |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CCCCGCGTTGCCATGG----- ------GTTGCCATGGCAACM |
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RFX5/MA0510.2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCCCGCGTTGCCATGG----- -----CGTTGCCATGGCAACG |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CCCCGCGTTGCCATGG------ ------GTTGCCATGGCAACCG |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCCCGCGTTGCCATGG----- -----CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCCCGCGTTGCCATGG----- -----CGTTGCCATGGCAACN |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCCCGCGTTGCCATGG ----CTGTTGCTAGGS |
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