Information for 6-TTGCGGTTTC (Motif 4)

A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
Reverse Opposite:
T C A G T G C A C T G A T C G A G T A C G T A C C T A G A T G C G T C A T G C A
p-value:1e-16
log p-value:-3.709e+01
Information Content per bp:1.585
Number of Target Sequences with motif179.0
Percentage of Target Sequences with motif21.54%
Number of Background Sequences with motif5427.1
Percentage of Background Sequences with motif11.44%
Average Position of motif in Targets50.0 +/- 26.1bp
Average Position of motif in Background50.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TTGCGGTTTC
TTGCGGTTT-
 A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TTGCGGTTTC
TTTGCGGTTT-
 A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TTGCGGTTTC
NNTGTGGTTT-
 A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGCGGTTTC
CTGTGGTTTN
 A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TTGCGGTTTC
GTCTGTGGTTT-
 A C G T A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTGCGGTTTC
GCTGTGGTTT-
 A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTGCGGTTTC
NNHTGTGGTTWN
 A C G T A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGCGGTTTC------
-TNTGGTTTCGATACN
 A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TTGCGGTTTC---
---TGGTTTCAGT
 A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTGCGGTTTC--
AGTTTCGGTTTCGN
 A C G T A C G T A C G T C A G T T A C G G A T C C A T G A C T G A G C T A G C T A C G T A G T C A C G T A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A