p-value: | 1e-3 |
log p-value: | -9.002e+00 |
Information Content per bp: | 1.900 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.48% |
Number of Background Sequences with motif | 14.3 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 40.1 +/- 23.6bp |
Average Position of motif in Background | 57.1 +/- 26.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.75 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCCKKGCTCW CCCCCTGCTGTG---- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTGCCKKGCTCW GGCCYCCTGCTGDGH--- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCCKKGCTCW NNTCCTGCTGTGNNN- |
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SD0002.1_at_AC_acceptor/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCCKKGCTCW NNACTTGCCTT----- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCCKKGCTCW TNTCCTGCTGTGNNG- |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTGCCKKGCTCW TCNCCTGCTGNGNNN- |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTGCCKKGCTCW TCCCAGMCRAGCCCC |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CCTGCCKKGCTCW CCTGCTGAGH--- |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CCTGCCKKGCTCW SNGCACCTGCHS------ |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CCTGCCKKGCTCW -------NGCTN- |
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