Information for 6-GCCCCGCCTT (Motif 4)

T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T
Reverse Opposite:
C G T A T C G A C A T G T A C G A G T C T A C G A T C G C T A G C T A G A G T C
p-value:1e-16
log p-value:-3.807e+01
Information Content per bp:1.684
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif11.75%
Number of Background Sequences with motif2200.2
Percentage of Background Sequences with motif4.74%
Average Position of motif in Targets49.6 +/- 27.1bp
Average Position of motif in Background49.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCGCCTT--
NNGGCCACGCCTTTN
 A C G T A C G T A C G T T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCTT-----
GCCCCGCCCCCTCCC
 T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCTT-
GGCCCCGCCCCC
 A C G T T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCTT--
NAGCCCCGCCCCCN
 A C G T A C G T T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCTT-
GCCCCGCCCCC
 T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCTT----
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCTT--
GCTCCGCCCMCY
 T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCTT
GCCMCRCCCH
 T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCTT
GCCCCGCCCC
 T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCTT---
TCGACCCCGCCCCTAT
 A C G T A C G T A C G T T C A G G A T C G A T C T A G C A T G C C T A G A T G C G T A C A G C T G C A T A C G T A C G T A C G T
G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T