Information for 12-GAGTCACGTG (Motif 19)

A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A G A T C A T C G G C A T A C T G G T C A A G T C C A G T A G T C
p-value:1e-10
log p-value:-2.315e+01
Information Content per bp:1.825
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif139.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets45.2 +/- 25.5bp
Average Position of motif in Background49.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.87
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTG-
-GGTCACGTGC
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GAGTCACGTG--
-GGTCACGTGGC
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

TFEB/MA0692.1/Jaspar

Match Rank:3
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGAT
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

TFE3/MA0831.1/Jaspar

Match Rank:4
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGNT
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.85
Offset:2
Orientation:forward strand
Alignment:GAGTCACGTG--
--GTCACGTGGT
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GAGTCACGTG-
CCGGTCACGTGA
 A C G T A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGAC
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.84
Offset:1
Orientation:forward strand
Alignment:GAGTCACGTG-
-GGTCACGTGA
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GAGTCACGTG--
--GTCACGTGAN
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GAGTCACGTG--
-GGTCACATGAC
 A C T G G T C A C T A G A C G T A G T C C G T A A T G C C T A G A C G T A C T G A C G T A C G T
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C