Information for 7-TCACGCGTGACGK (Motif 9)

A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
Reverse Opposite:
T G C A T A G C A T C G A G C T A G T C G C T A G T A C A C T G A G T C A C T G A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.475e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 28.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TCACGCGTGACGK
TTCACGCATGAGTT
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PAX1/MA0779.1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----TCACGCGTGACGK
NGCANTCATGCGTGACG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

PAX9/MA0781.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TCACGCGTGACGK--
CGTCACGCATGACTGCA
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCACGCGTGACGK
-CACGCA------
 A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TCACGCGTGACGK-
CTCTCGCGAGATCTG
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TCACGCGTGACGK
ATTCTCGCGAGA---
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCACGCGTGACGK
GGNTCTCGCGAGAAC-
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCACGCGTGACGK
GGTCACGTGG-----
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCACGCGTGACGK-
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCACGCGTGACGK-
GTCATGCHTGRCTGS
 A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C T G C G A T A C T G C T G A T A G C A C T G A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C