Information for 6-ATGTGGTTTC (Motif 5)

C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
Reverse Opposite:
T A C G T G C A T G C A C G T A A T G C G A T C T C G A A T G C C T G A G A C T
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.665
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.01%
Number of Background Sequences with motif866.7
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets47.9 +/- 29.2bp
Average Position of motif in Background51.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
NNTGTGGTTT-
 A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
CTGTGGTTTN
 C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC
GCTGTGGTTT-
 A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:ATGTGGTTTC--
-TGTGGATTNNN
 C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGTTTC
TTTGCGGTTT-
 A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:ATGTGGTTTC---
---TGGTTTCAGT
 C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATGTGGTTTC
TTGCGGTTT-
 C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGTTTC-
NNTGTGGATTSS
 A C G T C T G A G A C T T A C G A G C T C T A G T A C G G C A T A C G T A C G T A T G C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G