p-value: | 1e-7 |
log p-value: | -1.821e+01 |
Information Content per bp: | 1.847 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 14.3 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 43.3 +/- 26.3bp |
Average Position of motif in Background | 54.4 +/- 23.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ZIC1/MA0696.1/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGAVCTGGGT- CACAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGAVCTGGGT- NCGCAGCGGGGGGTC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGAVCTGGGT CACAGN------- |
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PB0157.1_Rara_2/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CACAGAVCTGGGT------ ---AGAGCGGGGTCAAGTA |
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RUNX1/MA0002.2/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----CACAGAVCTGGGT AAACCACAGAN------ |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGAVCTGGGT- NCNCAGCGGGGGGTC |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CACAGAVCTGGGT--- --TATAAGTAGGTCAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CACAGAVCTGGGT-- -----AAYTAGGTCA |
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Sox11/MA0869.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACAGAVCTGGGT AACACTGAAATTGTT |
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RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CACAGAVCTGGGT NWAACCACADNN------ |
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