Information for 13-AGCGCCTGTCAGT (Motif 17)

G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T
Reverse Opposite:
C T G A A G T C A C G T A T C G C G T A G T A C C G T A A C T G A T C G G T A C A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.122e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.7 +/- 27.3bp
Average Position of motif in Background61.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCTGTCAGT--
AAGCACCTGTCAATAT
 A C G T G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGCGCCTGTCAGT--
---GSCTGTCACTCA
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGCGCCTGTCAGT
---VGCTGWCAVB
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCTGTCAGT---
NNNCAGCTGTCAATATN
 A C G T G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGCGCCTGTCAGT
----GCTGTCAA-
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGCGCCTGTCAGT---
----NCTGTCAATCAN
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCTGTCAGT--
AATTACCTGTCAATAC
 A C G T G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGCGCCTGTCAGT---
----SCTGTCAVTCAV
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:AGCGCCTGTCAGT---
------TGGCAGTTGN
 G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCGCCTGTCAGT--
AAAGACCTGTCAATAC
 A C G T G T C A A C T G T A G C C A T G A T G C A G T C A C G T A C T G G A C T A T G C C G T A A C T G A G C T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C