Information for 12-GCAGGGCTCCCTT (Motif 16)

A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A T C G C G T A A C T G A T G C A G T C A G T C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.8 +/- 25.4bp
Average Position of motif in Background54.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGCTCCCTT-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGGGCTCCCTT
-CNGTCCTCCC--
 A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCAGGGCTCCCTT
-----GCTCCG--
 A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGCTCCCTT--
TTGGGGGCGCCCCTAG
 A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCAGGGCTCCCTT
CNAGGCCT-----
 A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGGCTCCCTT
DCHCAGCAGGRGGCC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCAGGGCTCCCTT-
GTCATGCHTGRCTGS
 A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCAGGGCTCCCTT
----GGCGCGCT-
 A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------GCAGGGCTCCCTT------
MACCTTCYATGGCTCCCTAKTGCCY
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G C A A G T C A G T C G A C T C A G T A T G C G A T C C T G A A C G T C T A G C T A G A G T C A C G T A G T C A G T C A G T C G A C T C G T A A C G T A G C T C T A G G A T C G A T C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GCAGGGCTCCCTT
WDNCTGGGCA-----
 A C G T A C G T A C T G A G T C G T C A A C T G A C T G A T C G G T A C A C G T A T G C A G T C A G T C A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T