Information for 2-TTTGYGGGSAGCGCCC (Motif 4)

A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
Reverse Opposite:
A C T G A C T G A T C G A T G C A T C G A G T C A G C T A T C G A G T C A G T C A G T C C T A G A T G C G T C A G T C A C G T A
p-value:1e-15
log p-value:-3.651e+01
Information Content per bp:1.805
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.9 +/- 31.7bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTGYGGGSAGCGCCC----
----TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTTGYGGGSAGCGCCC
--TNNGGGCAG-----
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TTTGYGGGSAGCGCCC
--------CAGCC---
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TTTGYGGGSAGCGCCC
------CGGAGC----
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTGYGGGSAGCGCCC
NCTTCCNGGAAGNN---
 A C G T A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTTGYGGGSAGCGCCC
-TTCCNGGAAG-----
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TTTGYGGGSAGCGCCC
TTTCCNGGAAAN----
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTTGYGGGSAGCGCCC
TTTCCAGGAAA-----
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTGYGGGSAGCGCCC
TTTTCGCGCGAA-----
 A C G T A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:TTTGYGGGSAGCGCCC
------GGGAGGACNG
 A C G T A C G T A C G T A T C G A G T C T A C G A C T G C T A G A T G C C T G A A C T G A T G C A T C G A T G C G T A C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G