Information for 3-CABCTGCASD (Motif 2)

G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
Reverse Opposite:
G C A T A T G C G C A T A C T G G T A C C G T A T A C G T A C G C G A T C A T G
p-value:1e-17
log p-value:-3.956e+01
Information Content per bp:1.627
Number of Target Sequences with motif176.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif4885.5
Percentage of Background Sequences with motif10.24%
Average Position of motif in Targets50.2 +/- 26.8bp
Average Position of motif in Background49.8 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---CABCTGCASD
SNGCACCTGCHS-
 A C G T A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CABCTGCASD--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CABCTGCASD
NNACAGCTGC---
 A C G T A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CABCTGCASD
AACACCTGCT--
 A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CABCTGCASD--
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CABCTGCASD
CGCAGCTGCG--
 A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CABCTGCASD
CGCACCTGCT--
 A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CABCTGCASD
NNCACCTGNN--
 A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CABCTGCASD
NNVVCAGCTGBN--
 A C G T A C G T A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CABCTGCASD
AGCAGCTGCT--
 A C G T A C G T G T A C G C T A A T G C A T G C A C G T A C T G A G T C C G T A T A C G C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T