Information for 14-CTGAGTGTGTTGT (Motif 19)

A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A G T C C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.172e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.8 +/- 22.9bp
Average Position of motif in Background57.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGTGTGTTGT
CTTGAGTGGCT---
 A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGAGTGTGTTGT------
----NNNTGTTGTTGTTNG
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGAGTGTGTTGT
TTRAGTGSYK---
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAGTGTGTTGT
NNNNGTTGATTGGGTCG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGTGTTGT
TTAAGTGCTT---
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGTGTTGT
TTGAGTGSTT---
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTGAGTGTGTTGT
NTGGGTGTGGCC-
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGTGTTGT---
NNGCGTGTGTGCNGCN
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGAGTGTGTTGT
-TGGGTGTGGC--
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGAGTGTGTTGT
----GTTTGTT--
 A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T