Information for 7-GAMGTCAYGT (Motif 15)

A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T
Reverse Opposite:
C G T A A T G C C T A G A C G T A T C G C G T A A G T C A C T G A C G T T A G C
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.691
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif484.3
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets56.4 +/- 22.5bp
Average Position of motif in Background49.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:GAMGTCAYGT
--AGTCACGC
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GAMGTCAYGT--
--GGTCACGTGC
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T
A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GAMGTCAYGT--
--GGTCACGTGG
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T
A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

TFEB/MA0692.1/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:GAMGTCAYGT---
---GTCACGTGAT
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

E-box(bHLH)/Promoter/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GAMGTCAYGT--
CCGGTCACGTGA
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GAMGTCAYGT---
---GTCACGTGAC
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GAMGTCAYGT---
---GTCACGTGNT
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GAMGTCAYGT---
---GTCACGTGGT
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:9
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GAMGTCAYGT---
---GTCACGTGAT
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GAMGTCAYGT---
---GTCACGTGAT
 A T C G G T C A T G A C T C A G G C A T A T G C C G T A A G T C A T C G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T