Information for 8-TRGAGGTTTA (Motif 9)

A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
Reverse Opposite:
C G A T G C T A T C G A T G C A G T A C G T A C G C A T A T G C A G C T T G C A
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.764
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif183.5
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets42.6 +/- 24.4bp
Average Position of motif in Background49.5 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TRGAGGTTTA
TTGCGGTTT-
 A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TRGAGGTTTA
TTTGCGGTTT-
 A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TRGAGGTTTA
NNTGTGGTTT-
 A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TRGAGGTTTA-
AAGAGGATTAG
 A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TRGAGGTTTA--
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TRGAGGTTTA----
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TRGAGGTTTA
--NGGGATTA
 A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TRGAGGTTTA--
--VRGGATTARN
 A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A A C G T A C G T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TRGAGGTTTA
GTCTGTGGTTT-
 A C G T A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TRGAGGTTTA---
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C G T T C G A A T C G C G T A A C T G A C T G A C G T A G C T C G A T C G T A A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G