Information for 3-TGGTTGTMACCCM (Motif 6)

A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G A C T G A C T G A C G T A C G T C G T A G A T C G T C A C T G A A G T C A G T C C G T A
p-value:1e-13
log p-value:-3.154e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 15.0bp
Average Position of motif in Background83.5 +/- 5.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGGTTGTMACCCM
GARTGGTCATCGCCC-
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGGTTGTMACCCM-----
-TGTCGTGACCCCTTAAT
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGTTGTMACCCM
CTGTCTGTCACCT-
 A C G T A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGGTTGTMACCCM
--GCTGTTACCCT
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTGTMACCCM
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TGGTTGTMACCCM-
------TGACCYCT
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGTTGTMACCCM-----
-NNNNTTGACCCCTNNNN
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

SREBF1/MA0595.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGGTTGTMACCCM--
-----ATCACCCCAC
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTGTMACCCM
NNTGTGGTTT-------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGTTGTMACCCM----
NNNNGGTACCCCCCANN
 A C G T A C T G A C T G A G C T A C G T C T A G A C G T G T C A G T C A A G T C A G T C A G T C G T A C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C