Information for 24-GAATAGGGACTAG (Motif 45)

C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A A C T G C A G T T A G C G A T C A T G C C G A T G T C A A C G T A C G T A G T C
p-value:1e-6
log p-value:-1.427e+01
Information Content per bp:1.721
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.2 +/- 9.4bp
Average Position of motif in Background62.6 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAATAGGGACTAG
CCAAAAATAG-------
 A C G T A C G T A C G T A C G T C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAATAGGGACTAG-
----NNGGATTAGN
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GAATAGGGACTAG-
-----GGGATTANN
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAATAGGGACTAG
--AAGAGGATTAG
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0125.1_Obox5_2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GAATAGGGACTAG-----
-NANAGGGATTAATTATN
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GAATAGGGACTAG-
------GGATTAGC
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAATAGGGACTAG-
----GNGGATTAGN
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GAATAGGGACTAG-----
-NNAAGGGATTAACGANT
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAATAGGGACTAG-
----VRGGATTARN
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAATAGGGACTAG-----
-TGTAGGGATTAATTGTC
 C T A G G T C A C G T A A C G T C G T A A T C G C T A G A T C G G T C A A G T C C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C