Information for 23-TCTGACCATCTCT (Motif 40)

A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
Reverse Opposite:
G T C A A T C G C G T A C T A G G T C A A C G T A C T G A T C G A G C T A G T C C T G A A T C G G T C A
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.791
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.7 +/- 24.2bp
Average Position of motif in Background52.1 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGACCATCTCT
--TGACCT-----
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TCTGACCATCTCT
CTTATCTCHMCATCT--
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGACCATCTCT
--TGACCYCT---
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCTGACCATCTCT-
--TGACCTTTNCNT
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTGACCATCTCT
--TGACCTTGAT-
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCTGACCATCTCT
-NTGACCTTGA--
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGACCATCTCT
NCTGTCAATCAN-
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTGACCATCTCT
-ATGACCTTGA--
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCTGACCATCTCT-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTGACCATCTCT
-GTGACCTT----
 A C G T A T G C A G C T C T A G C T G A A T G C G T A C T C G A C A G T A G T C C G A T A T G C A C G T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T