Information for 20-ATTATGGCTGGCG (Motif 34)

C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
Reverse Opposite:
A G T C A T C G A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T G T C A C G T A A C G T
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 21.2bp
Average Position of motif in Background49.2 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATTATGGCTGGCG---
NNTNNTGTCTGGNNTNG
 A C G T C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATTATGGCTGGCG
-TAATGGCGGNC-
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATTATGGCTGGCG
---TWGTCTGV--
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATTATGGCTGGCG
ATGATKGATGRC-
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTATGGCTGGCG
CAAGATGGCGGC--
 A C G T C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATTATGGCTGGCG
TTTTATGGCTN---
 A C G T C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATTATGGCTGGCG
---CTGTCTGG--
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ATTATGGCTGGCG
-----NGCTN---
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATTATGGCTGGCG-------
---NAGANTGGCGGGGNGNA
 C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATTATGGCTGGCG
CAAGATGGCGGC--
 A C G T C G T A A C G T A C G T T G C A A C G T A C T G A C T G A G T C A C G T A C T G A C T G A T G C A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T