Information for 19-TGMYCSCTTRGTC (Motif 33)

A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G C T C G T A C G T A A C T G A T C G A C T G C T A G A C G T A G T C C G T A
p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 20.9bp
Average Position of motif in Background51.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGMYCSCTTRGTC
TGTCGTGACCCCTTAAT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGMYCSCTTRGTC
NNNNTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGMYCSCTTRGTC
TGACCYCT-----
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGMYCSCTTRGTC
NNANTTGACCCCTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGMYCSCTTRGTC--
-----CCTTTGTTTT
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGMYCSCTTRGTC
AGGVNCCTTTGT-
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGMYCSCTTRGTC--
-----YCTTTGTTCC
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGMYCSCTTRGTC
-----CCTTTGTT
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGMYCSCTTRGTC-----
--ANTCCTTTGTCTNNNN
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGMYCSCTTRGTC--
-----CCWTTGTYYB
 A C G T A C T G G T C A A G T C A G T C A T G C A G T C A C G T C G A T T C G A A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G