Information for 15-GATCACAGSTCAA (Motif 28)

A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
Reverse Opposite:
A G C T A C G T A T C G C G T A A T C G A G T C A C G T A C T G A C G T A C T G C T G A C G A T G T A C
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.783
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.6 +/- 25.8bp
Average Position of motif in Background56.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG/MA0856.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATCACAGSTCAA
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATCACAGSTCAA
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATCACAGSTCAA
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GATCACAGSTCAA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATCACAGSTCAA
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATCACAGSTCAA
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GATCACAGSTCAA
---CACAGN----
 A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GATCACAGSTCAA
---AACAGCTG--
 A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GATCACAGSTCAA---
TCTCAAAGGTCACCTG
 A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATCACAGSTCAA-
NTATTGACAGCTNNTT
 A C G T A C G T A C T G C G T A A G C T G T A C C G T A G T A C C G T A A C T G A T G C C G A T T A G C G T C A C T G A A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T