Information for 16-CACTTTDCCTHCHAGA (Motif 27)

A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
Reverse Opposite:
A C G T A G T C A C G T C A G T A C T G C A G T C G T A C T A G A C T G G A C T G T C A C G T A C G T A A C T G A C G T A T C G
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.8 +/- 23.6bp
Average Position of motif in Background54.0 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACTTTDCCTHCHAGA
ACCACTTGAA--------
 A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACTTTDCCTHCHAGA
TAAGCCACTTGAAATT-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACTTTDCCTHCHAGA
CCACTTGAA--------
 A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CACTTTDCCTHCHAGA
TAAGCCACTTAACATT-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACTTTDCCTHCHAGA
TCACTTTCACTTTCN--
 A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CACTTTDCCTHCHAGA
TAAGCCACTTGAAATT-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACTTTDCCTHCHAGA
-ACTTTCGTTTCT---
 A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACTTTDCCTHCHAGA
ACCACTTAA---------
 A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CACTTTDCCTHCHAGA
TAAGCCACTTGAATTT-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACTTTDCCTHCHAGA
MRSCACTYAA---------
 A C G T A C G T A C G T A T G C C G T A A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T G T A C A G T C G C T A C G T A A C T G T G C A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T