Information for 12-AGTATCAATGTTAAGT (Motif 16)

G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
Reverse Opposite:
C G T A G A T C A G C T G A C T G C T A C G T A A G T C C G T A A C G T A C G T A C T G G T C A C G A T C G T A G T A C A C G T
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.698
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.6 +/- 25.2bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTATCAATGTTAAGT
NNTNNCAATATTAG--
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTATCAATGTTAAGT
NNTNNCAATATTAG--
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTATCAATGTTAAGT
ANNTCCATTGTTCNNN
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGTATCAATGTTAAGT
-----TATTGTTTATT
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTATCAATGTTAAGT
AACAATTTCAGTGTT----
 A C G T A C G T A C G T G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTATCAATGTTAAGT
AACAATAACATTGTT----
 A C G T A C G T A C G T G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGTATCAATGTTAAGT
ACTATGAATGAATGAT
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGTATCAATGTTAAGT
NTTNTATGAATGTGNNC-
 A C G T A C G T G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGTATCAATGTTAAGT
TWGHWACAWTGTWDC--
 A C G T G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGTATCAATGTTAAGT-
-----GAATGTTTGTTT
 G T C A A C T G C G A T G C T A A C G T T A G C C G T A T G C A G A C T A C T G C G A T C A G T C T G A C T G A C T A G C G A T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T