Information for 17-GTGCTAGCACAGA (Motif 23)

A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
Reverse Opposite:
A C G T A T G C C G A T A C T G A C G T A C T G A G T C A G C T C G T A A C T G A G T C C G T A A G T C
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.7 +/- 17.4bp
Average Position of motif in Background25.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGCTAGCACAGA-----
--CGAAGCACACAAAATA
 A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTAGCACAGA
BCNGGTTCTAGANCN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GTGCTAGCACAGA
CTAAGGTTCTAGATCAC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTGCTAGCACAGA
--CCAGGAACAG-
 A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTAGCACAGA
KGTTGCTAGGMAACA
 A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTGCTAGCACAGA-----
--AGCGGCACACACGCAA
 A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------GTGCTAGCACAGA
CGAACAGTGCTCACTAT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTGCTAGCACAGA
ATGCCAACC----
 A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTAGCACAGA
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTGCTAGCACAGA
-TGCTGACTCA--
 A C T G A C G T A C T G A G T C A C G T C T G A C T A G A G T C C G T A G T A C C G T A A T C G C G T A
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T