Information for 8-GCMAAAMAMATMC (Motif 10)

A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 19.7bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCMAAAMAMATMC
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCMAAAMAMATMC
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCMAAAMAMATMC--
GTTCAAAAAAAAAATTC
 A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCMAAAMAMATMC-
GCAAAACATTACTA
 A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCMAAAMAMATMC
GCTAAAAATAGC-
 A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCMAAAMAMATMC
TGCCAA--------
 A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCMAAAMAMATMC
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCMAAAMAMATMC
CAATTGCAAAAATAT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCMAAAMAMATMC
AGCCGAAAAAAAAAT-
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCMAAAMAMATMC
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A C G T A G T A C C G T A G T A C C T G A C G A T G T A C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T