Information for 12-CGGAGGGATC (Motif 19)

A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
Reverse Opposite:
A C T G C G T A A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.959
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.8 +/- 9.0bp
Average Position of motif in Background54.4 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGAGGGATC-
GGGCGGGAAGG
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGGAGGGATC--
ANTNCCGGGGGGAANTT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGAGGGATC-
-GGCGGGAARN
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C A C G T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGGAGGGATC
BTKGGCGGGAAA
 A C G T A C G T A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGGAGGGATC--
----NGGATTAN
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGGAGGGATC
CGGAGC----
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGAGGGATC
ACCGGAAGTG--
 A C G T A C G T A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGAGGGATC
CWGGCGGGAA-
 A C G T A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGAGGGATC-
GGGCGGGAAGG
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGAGGGATC
GGGCGGGACC
 A G T C A C T G A C T G C G T A A C T G A C T G A C T G C G T A A C G T G T A C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C