p-value: | 1e-9 |
log p-value: | -2.114e+01 |
Information Content per bp: | 1.674 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 1.61% |
Number of Background Sequences with motif | 87.6 |
Percentage of Background Sequences with motif | 0.19% |
Average Position of motif in Targets | 47.9 +/- 24.6bp |
Average Position of motif in Background | 55.3 +/- 30.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0075.1_Hoxd10/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT----- -NTNAATTTTATTGNATT |
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PH0013.1_Cdx2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT------ ---NAATTTTATTACCNNN |
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PH0057.1_Hoxb13/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT----- --NNAATTTTATTGGNTN |
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PH0078.1_Hoxd13/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT----- --NNANTTTTATTGGNNN |
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CDX1/MA0878.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT-- ------TTTTATTGC |
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HOXA13/MA0650.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT-- -----TTTTTATTGG |
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PH0046.1_Hoxa10/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT----- --TNAATTTTATTACCTN |
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Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GAGAAACTTTATT- --GWAAYHTGAKMC |
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HOXA10/MA0899.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT--- -----NTTTTATTACN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GAGAAACTTTATT-- -----NTTTTATGAC |
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