Information for 6-TGCAGACTGCSGT (Motif 10)

A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
Reverse Opposite:
C T G A A G T C A T G C A C T G A G T C C G T A A C T G A C G T A T G C A C G T A C T G A G T C G T C A
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.833
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.2 +/- 12.1bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGCSGT
-CCAGACRSVB--
 A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGCSGT
-CCAGACAG----
 A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCAGACTGCSGT
-BCAGACWA----
 A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGACTGCSGT
NNTTTGCACACGGCCC-
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGCAGACTGCSGT
TTTGCACACGGCAC-
 A C G T A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCAGACTGCSGT
CTGGCAGNCTGCCA-
 A C G T A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCAGACTGCSGT-
CGACCAACTGCCGTG
 A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACTGCSGT
AAAATGCTGACT-----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCAGACTGCSGT
TGCTGACTCA---
 A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACTGCSGT
AATTTGCTGAC------
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A A T C G C G T A A G T C C G A T A C T G A G T C A T C G C T A G A G C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T