Information for 3-AGGAGATTGCCAC (Motif 6)

C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T A C T G C T A G A G T C G T C A C G T A A G C T A G T C C G A T A G T C A G T C A C G T
p-value:1e-18
log p-value:-4.270e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 24.4bp
Average Position of motif in Background45.0 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGAGATTGCCAC
-GGGGATTCCCCC
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGAGATTGCCAC--
GGGCGATGACCAYTC
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGAGATTGCCAC
-GGAAATTCCC--
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGAGATTGCCAC
-GGGGATTTCC--
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGAGATTGCCAC
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGAGATTGCCAC
NGGGGATTTCCC-
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AGGAGATTGCCAC
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGAGATTGCCAC-
--BTGABTGACAGS
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGAGATTGCCAC
AGGGGATTCCCCT
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGAGATTGCCAC
AGGGGAATCCCCT
 C G T A A C T G A C T G C G T A A C T G C T G A A C G T A C G T C T A G A G T C A G T C C T G A A G T C
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T