Information for 22-ATCAGCAGRC (Motif 46)

C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C
Reverse Opposite:
A C T G G A T C A G T C A C G T A C T G A T G C A C G T A C T G C G T A A C G T
p-value:1e-5
log p-value:-1.301e+01
Information Content per bp:1.888
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif60.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets57.1 +/- 26.3bp
Average Position of motif in Background51.1 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATCAGCAGRC-
GTCAGCANNTN
 C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCAGRC
DCTCAGCAGG-
 A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATCAGCAGRC
TGAGTCAGCA---
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATCAGCAGRC-
CTGAGTCAGCAATTT
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCAGCAGRC--
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATCAGCAGRC---
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGCAGRC-
NGTCAGCANTTT
 A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCAGCAGRC
NAHCAGCTGD-
 A C G T C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCAGCAGRC
ATCAGCTGTT
 C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCAGCAGRC--
CACAGCAGGGGG
 C G T A A C G T A G T C C G T A A T C G A G T C C G T A C T A G C T A G A G T C A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G