Information for 19-RMGYCCATCTWCC (Motif 33)

C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A A C T G C G T A C A G T C T A G A C T G C T A G A G T C A C T G A G T C
p-value:1e-12
log p-value:-2.773e+01
Information Content per bp:1.853
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif39.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.8 +/- 29.8bp
Average Position of motif in Background50.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RMGYCCATCTWCC-------
----CCGTCTTCCCCCTCAC
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RMGYCCATCTWCC
GCNGCCATCTTG-
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RMGYCCATCTWCC
---GCCATCTGTT
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RMGYCCATCTWCC
GCCGCCATCTTG-
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RMGYCCATCTWCC
---ACCATCTGTT
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RMGYCCATCTWCC---
CCNNACCATCTGGCCTN
 A C G T C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RMGYCCATCTWCC----
-CGACCAACTGCCATGC
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RMGYCCATCTWCC---
-CGACCAACTGCCGTG
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C A C G T A C G T A C G T
A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:RMGYCCATCTWCC---
GAGCCCTTGTCCCTAA
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RMGYCCATCTWCC
--GGCCATTAAC-
 C T A G G T A C A C T G A G T C A G T C A G T C G C T A C G A T G T A C A C G T G C A T A G T C A G T C
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T