Information for 6-GWCCCYAGCAAGGTGR (Motif 14)

C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
Reverse Opposite:
G A C T G T A C G T C A G A T C A T G C A G C T A C G T A C T G G T A C C G A T T C G A A C T G A C T G C T A G G C T A G A T C
p-value:1e-15
log p-value:-3.648e+01
Information Content per bp:1.645
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.6 +/- 20.7bp
Average Position of motif in Background50.7 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR
TACCATAGCAACGGT-
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR
CCGCATAGCAACGGA-
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR
---CACAGCAGGGGG-
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR
--SCCTAGCAACAG--
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GWCCCYAGCAAGGTGR---
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GWCCCYAGCAAGGTGR
TGTTKCCTAGCAACM---
 A C G T A C G T C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GWCCCYAGCAAGGTGR
CGACCCAATCAACGGTG
 A C G T C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Esrra/MA0592.2/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR-
------TTCAAGGTCAT
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR-
-------TCAAGGTCAT
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GWCCCYAGCAAGGTGR
------BTCAAGGTCA
 C T A G C G A T A G T C G T A C T G A C A G C T C G T A C A T G G T A C C G T A C T G A A T C G C T A G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A