Information for 7-GTCTCTGTGCGTG (Motif 9)

A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
Reverse Opposite:
A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A T C G G T C A A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.892
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 27.8bp
Average Position of motif in Background50.3 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTGTGCGTG-
NNNNTTGTGTGCTTNN
 A C G T A C G T A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GTCTCTGTGCGTG-
----CTGTTCCTGG
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GTCTCTGTGCGTG
-------TGCGTG
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTGTGCGTG-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTCTCTGTGCGTG---
------TTGCGTGCVA
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCTCTGTGCGTG
--GTCTGTGGTTT
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCTCTGTGCGTG
--CTTTGT-----
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTCTCTGTGCGTG
---GCTGTGGTTT
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTCTCTGTGCGTG
---GCTGTG----
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCTCTGTGCGTG-
GTCACGCTCNCTGA
 A C T G A C G T A G T C A C G T A T G C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A