Information for 3-TKTGGKTYTGCMA (Motif 6)

C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
Reverse Opposite:
C G A T A C T G A C T G T A G C T C G A C T A G C T G A G T A C A G T C A G T C G T C A T G A C C G T A
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 27.3bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TKTGGKTYTGCMA
GTCTGTGGTTT-----
 A C G T A C G T A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TKTGGKTYTGCMA
NNTGTGGTTT-----
 A C G T A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TKTGGKTYTGCMA
NNHTGTGGTTWN----
 A C G T A C G T A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TKTGGKTYTGCMA
GCTGTGGTTT-----
 A C G T A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TKTGGKTYTGCMA
CTGTGGTTTN----
 A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TKTGGKTYTGCMA--
-------TTGCCAAG
 C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TKTGGKTYTGCMA
--TGGGTGTGGC-
 C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TKTGGKTYTGCMA-
---NATTGTGCAAT
 C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TKTGGKTYTGCMA
TTTGCGGTTT-----
 A C G T A C G T C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TKTGGKTYTGCMA---
------GGTGCCAAGT
 C G A T A C T G C A G T A C T G A C T G C A T G G A C T G A T C A G C T A T C G G T A C G T A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T