Information for 2-GCTTTGAGTGAAG (Motif 5)

C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
Reverse Opposite:
A G T C A C G T C G A T G T A C C G T A A G T C A C G T A G T C C G T A C G T A C G T A A C T G A G T C
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 33.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG-
--TTTGATTGATGN
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G A C G T
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCTTTGAGTGAAG
---TTRAGTGSYK
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTTTGAGTGAAG
--BTBRAGTGSN-
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG
--CTTGAGTGGCT
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTTTGAGTGAAG---
ACTATGAATGAATGAT
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG
----TGAGTCA--
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG
---TTGAGTGSTT
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG
--CTYRAGTGSY-
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTTGAGTGAAG--
TAATTCAATGAAGTG
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTTTGAGTGAAG
---TTGATTGN--
 C T A G A G T C A C G T A C G T C G A T A C T G C G T A A C T G A C G T A C T G C G T A C G T A C T A G
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T