Information for 2-GGTTGTGGTT (Motif 4)

C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T
Reverse Opposite:
T G C A G C T A G T A C T G A C T C G A T G A C T C G A T C G A T A G C G T A C
p-value:1e-12
log p-value:-2.804e+01
Information Content per bp:1.610
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif14.46%
Number of Background Sequences with motif3402.1
Percentage of Background Sequences with motif7.20%
Average Position of motif in Targets46.4 +/- 26.1bp
Average Position of motif in Background50.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GGTTGTGGTT-
-GCTGTGGTTT
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:GGTTGTGGTT-
-NNTGTGGTTT
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGTTGTGGTT--
NNHTGTGGTTWN
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:GGTTGTGGTT--
--CTGTGGTTTN
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GGTTGTGGTT-
GTCTGTGGTTT
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:GGTTGTGGTT-
--TTGCGGTTT
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GGTTGTGGTT-
-TTTGCGGTTT
 C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGTTGTGGTT
NTGGGTGTGGCC
 A C G T A C G T C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGTGGTT
TGGGTGTGGCN
 A C G T C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTTGTGGTT
ACAGGATGTGGT-
 A C G T A C G T A C G T C A T G A T C G A G C T A G C T A C T G A G C T A C T G C A T G C G A T A C G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T