Information for 8-GCCAAGATCC (Motif 16)

A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A T G C A C G T A C G T A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.929
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif25.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.9 +/- 25.9bp
Average Position of motif in Background49.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGATCC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGATCC
TGCCAA-----
 A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAGATCC
GGTGCCAAGT---
 A C G T A C G T A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGATCC
TTGCCAAG----
 A C G T A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCAAGATCC-
---ATAATCCC
 A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAGATCC-----
TGCCAAAATAAACANN
 A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCAAGATCC
BTCAAGGTCA
 A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGATCC--
AAGATAAGATAACA
 A C G T A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCAAGATCC------
GATAACATCCTAGTAG
 A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCAAGATCC-----
TATTCAAGGTCATGCGA
 A C G T A C G T A C T G A G T C G T A C C G T A C G T A A T C G C G T A A C G T G T A C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A