Information for 12-CTCTTTATAAAAC (Motif 8)

A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A G C T C G T A A C G T G T C A C G T A C G T A A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.244e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 29.3bp
Average Position of motif in Background51.3 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTTTATAAAAC---
CTACCAATAAAATTCT
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCTTTATAAAAC--
NNNTTTNTAATACNG
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTTTATAAAAC--
TCTTTATATATAAATA
 A C G T A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTTATAAAAC
TCTATTTTTAGA--
 A C G T A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTTATAAAAC
TCTATTTATAGN--
 A C G T A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTCTTTATAAAAC
------ATTAAA-
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCTTTATAAAAC--
-----ACTGAAACCA
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTTATAAAAC
TTCTATTTTTAGNNN
 A C G T A C G T A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTTTATAAAAC
--NCYAATAAAA-
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTTTATAAAAC-
--NGYCATAAAWCH
 A G T C A C G T G T A C C G A T C G A T A C G T T G C A A C G T C T G A C G T A C G T A C G T A A G T C A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A