Information for 11-AAACCCTTTG (Motif 13)

C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C T G A C T G A C T G A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.941
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif35.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.1 +/- 21.0bp
Average Position of motif in Background60.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAACCCTTTG--
----CCTTTGTT
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAACCCTTTG
AAACMATTAN
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACCCTTTG-------
AATCCCTTTGATCTATC
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAACCCTTTG--
----CCWTTGTY
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAACCCTTTG----
----CCTTTGTTTT
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAACCCTTTG------
-AACCCTTTGATCTTT
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAACCCTTTG----
----CCTTTGAWGT
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AAACCCTTTG----
----CCTTTGATGT
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAACCCTTTG-------
ATTTCCTTTGATCTATA
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAACCCTTTG-------
NNTTCCTTTGATCTANA
 C G T A G T C A C G T A A G T C A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A