Information for 3-GRGCAGCTGCCAGGTG (Motif 8)

A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C G T A C C G A T A C T G A C T G A G T C C G T A A C T G A G T C C G A T A C T G A T G C A G T C A T G C
p-value:1e-13
log p-value:-3.067e+01
Information Content per bp:1.807
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 21.5bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GRGCAGCTGCCAGGTG
-AGCAGCTGCT-----
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GRGCAGCTGCCAGGTG--
--------NNCAGGTGNN
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GRGCAGCTGCCAGGTG
-NVCAGCTGBBNN---
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GRGCAGCTGCCAGGTG--
--------GACAGGTGTN
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GRGCAGCTGCCAGGTG
NNAGCAGCTGCT-----
 A C G T A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GRGCAGCTGCCAGGTG
CGACCAACTGCCATGC-
 A C G T A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GRGCAGCTGCCAGGTG
SNGCACCTGCHS----
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GRGCAGCTGCCAGGTG
NNGCAGCTGTC-----
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GRGCAGCTGCCAGGTG
NNNNAGCAGCTGCTGAN--
 A C G T A C G T A C G T A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:10
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:GRGCAGCTGCCAGGTG--
--------NNCAGGTGCG
 A T C G C T A G A T C G A G T C G C T A A C T G A G T C C G A T A C T G A G T C A G T C C G T A A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G