Information for 2-GATGTGGTTT (Motif 2)

A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
Reverse Opposite:
G C T A C T G A T G C A G A T C G T A C T G C A A T G C C G T A G C A T T G A C
p-value:1e-27
log p-value:-6.258e+01
Information Content per bp:1.653
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif1926.2
Percentage of Background Sequences with motif4.09%
Average Position of motif in Targets46.2 +/- 26.2bp
Average Position of motif in Background50.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GATGTGGTTT
NNTGTGGTTT
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GATGTGGTTT
GCTGTGGTTT
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GATGTGGTTT-
-CTGTGGTTTN
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GATGTGGTTT-
NNHTGTGGTTWN
 A C G T A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GATGTGGTTT
GTCTGTGGTTT
 A C G T A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GATGTGGTTT
TTTGCGGTTT
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GATGTGGTTT
-TTGCGGTTT
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GATGTGGTTT
ACAGGATGTGGT--
 A C G T A C G T A C G T A C G T A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GATGTGGTTT---
--TGTGGATTNNN
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATGTGGTTT--
NNTGTGGATTSS
 A C T G C G T A G C A T T A C G A C G T C A T G C T A G A C G T G A C T C G A T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G