Information for 12-GGCGAAGGGTCAG (Motif 16)

A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C G T A G T C A C T G A G T C A G T C
p-value:1e-7
log p-value:-1.648e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.5 +/- 31.6bp
Average Position of motif in Background41.2 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCGAAGGGTCAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCGAAGGGTCAG
TAGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGCGAAGGGTCAG
TGGGGCAAAGGTCA-
 A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCGAAGGGTCAG----
GGCGAGGGGTCAAGGGC
 A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGCGAAGGGTCAG
----AGRGGTCA-
 A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCGAAGGGTCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCGAAGGGTCAG
ANGNAAAGGTCA-
 A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCGAAGGGTCAG---
CGCGCCGGGTCACGTA
 A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCGAAGGGTCAG---
TCTCAAAGGTCACGAG
 A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCGAAGGGTCAG
GGGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A G T C A C T G C G T A C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C T G
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T