Information for 6-GGGGAACCCC (Motif 12)

C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C
Reverse Opposite:
A C T G T A C G C A T G C A T G A C G T A G C T A G T C A G T C T G A C G A T C
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.659
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.55%
Number of Background Sequences with motif1045.0
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets53.5 +/- 25.9bp
Average Position of motif in Background51.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCCC-
GGGGGAATCCCC
 A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAACCCC--
AGGGGAATCCCCT
 A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCCC--
AGGGGAATCCCCT
 A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGGGAACCCC-
-GGAAATCCCC
 C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGGAACCCC--
GGGAAATCCCCN
 C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGGAACCCC
TGGGGA-----
 A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGGGAACCCC--
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GGGGAACCCC-
-GGAAATTCCC
 C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAACCCC---
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGGAACCCC-
-GGAAANCCCC
 C T A G A C T G T C A G T C A G T C G A G T C A G T A C G T A C A T G C T G A C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C