Information for 2-AAAGAGGACCAMA (Motif 3)

C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
Reverse Opposite:
A G C T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 6.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAGAGGACCAMA
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGGACCAMA
AAAAAGAGGAAGTA-
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGAGGACCAMA---
-ARGAGGMCAAAATGW
 C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A A C G T A C G T A C G T
A C G T T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAGAGGACCAMA
--AGAGGAA----
 C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAAGAGGACCAMA
TGTAAACAGGA-----
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGGACCAMA
AAAAAGCGGAAGTA-
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAGAGGACCAMA
AAAGRGGAAGTG-
 C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAGGACCAMA
GAAACTGAAACT--
 A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AAAGAGGACCAMA---
GGAAAGCGAAACCAAAAC
 A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------AAAGAGGACCAMA--
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C T G C T A G C G T A T A G C A G T C C G T A G T A C C T G A A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A