Information for 9-CNGCVGCTGM (Motif 22)

A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C
Reverse Opposite:
A C T G T G A C T G C A C T A G A T G C A C G T A T C G T G A C T C A G A T C G
p-value:1e-4
log p-value:-1.029e+01
Information Content per bp:1.525
Number of Target Sequences with motif158.0
Percentage of Target Sequences with motif18.88%
Number of Background Sequences with motif6583.1
Percentage of Background Sequences with motif13.86%
Average Position of motif in Targets53.7 +/- 26.2bp
Average Position of motif in Background50.5 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CNGCVGCTGM-
-CGCAGCTGCG
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CNGCVGCTGM-
NNAGCAGCTGCT
 A C G T A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CNGCVGCTGM
CAGCAGCTGN
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CNGCVGCTGM-----
CTCAGCAGCTGCTACTG
 A C G T A C G T A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CNGCVGCTGM-
NNGCAGCTGTC
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CNGCVGCTGM-
-AGCAGCTGCT
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CNGCVGCTGM-
NNGCAGCTGTT
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CNGCVGCTGM
-ANCAGCTG-
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CNGCVGCTGM
----NGCTN-
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CNGCVGCTGM--
--GCAGCTGTNN
 A T G C A G T C A C T G T A G C T G C A A T C G G A T C A C G T A C T G T G A C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T